Publications of the Group

Publications

Group publications are from 2016 on.

Preprints

  • Gokhale, C.S., Bulbulia, J., and Frean, M. Collective Narratives Catalyse Cooperation. SocArXiv. doi:10.31235/osf.io/jnu87
  • Bargués-Ribera, M., Reeves, R.G., Gokhale, C.S., Eco-evolutionary dynamics of Plasmodium genotypes under mass drug administration, bioRxiv-818039
  • Rabajante, J.F., Anzia, E.L., Gokhale, C.S., On a mechanistic process of macroparasite aggregation, bioRxiv-680041
  • Gokhale, C.S., Wignall, A.E., On the innovation and evolution of predatory tactics, bioRxiv-530238

Peer-reviewed

Book Chapter

        2020

  1. Gokhale, C.S., Park, H-J., Eco-evolutionary Spatial dynamics of Non-linear Social Dilemmas, in Advances in Dynamic Games, eds. David M. Ramsey and Jérôme Renault bioRxiv version-660266

Journal articles

        2021

  1. Gokhale, C.S., Giamo, S., & Remigi, P. 2021 Memory shapes microbial populations, PLoS Computational Biology, forthcoming bioRxiv-370106
  2. Verma, P., Reeves, R. G. & Gokhale, C. S. 2021 A common gene drive language eases regulatory process and eco-evolutionary extensions. BMC Ecol Evol 21, 156. bioRxiv-970103
  3. Mafessoni, F., Lachmann, M. & Gokhale, C. S. 2021 On the fitness of informative cues in complex environments. J Theor Biol 527, 110819 bioRxiv-066571
  4. Venkateswaran, V. R., Roth, O. & Gokhale, C. S. 2021 Consequences of combining sex‐specific traits. Evolution doi:10.1111/evo.14204. bioRxiv-version-892810

  5. Park, H.J.$, Gokhale, C.S.$ , Bertels, F. ($ joint first authors), 2021. How sequence populations persist inside bacterial genomes. Genetics doi:10.1093/genetics/iyab027.bioRxiv-version-170514

    2020
  6. Pathak, S., Verma, P., Ram, S. K. & Sengupta, S. How strategy environment and wealth shape altruistic behaviour: cooperation rules affecting wealth distribution in dynamic networks. Proc Royal Soc B, 287, 20202250 bioRxiv version-077131
  7. Denton, J.A., Gokhale, C.S., (joint first authors) 2020. Synthetic symbiosis under environmental disturbances. mSystems, 5 (3) bioRxiv version-395426

  8. Bargués-Ribera, M., Gokhale, C.S., 2020. Eco-evolutionary agriculture: host-pathogen dynamics in crop rotations. PLOS Computational Biology, 16(1): e1007546 bioRxiv-402313

    2019
  9. Venkateswaran, V.R., Gokhale, C.S., 2019. Evolutionary dynamics of complex multiple games. Proceedings of the Royal Society B: Biological Sciences,286(1905), p.20190900 OpenAccess bioRxiv-302265
  10. Denton, J.A., Gokhale, C.S., 2019. Synthetic mutualism and the intervention dilemma. Life - Special Issue “Synthetic Biology: From Living Computers to Terraformation”, 9 (1), 15

  11. Park, H-J., Gokhale, C.S., 2019. Ecological feedback on diffusion dynamics. Journal of the Royal Society Open Science, 6 (2), 181273

     2018
  12. Czuppon, P, Gokhale, C.S., 2018. Disentangling eco-evolutionary effects on trait fixation. Theoretical Population Biology, 124, 93-107.

  13. Roemhild, R., Gokhale, C.S., Dirksen, P., Blake, C., Rosenstiel, P., Traulsen, A., Andersson, D., Schulenburg, H., 2018. Cellular hysteresis as a novel principle to maximize the efficacy of antibiotic therapy, PNAS, 115(39), 9767-9772.

     2017
  14. Daubech, B., Remigi, P., Doin de Moura, G., Marchetti, M., Pouzet, C., Auriac, M-C., Gokhale, C.S., Masson-Biovin C., Capela, D., 2017. Spatio-temporal control of mutualism in legumes helps spread symbiotic nitrogen fixation, eLife, 6, 57.
  15. Schenk, H., Traulsen, A., Gokhale, C.S., 2017. Chaotic provinces in the kingdom of the Red Queen. Journal of Theoretical Biology, 431, pp.1–10.
  16. Liu, Y., Gokhale C.S., Rainey P.B., Zhang, X-X., 2017. Unravelling the complexity and redundancy of carbon catabolic repression in Pseudomonas fluorescens SBW25. Molecular microbiology, 105(4), pp.589–605.
  17. Bertels, F., Gokhale, C.S., Traulsen, A., 2017. Discovering Complete Quasispecies in Bacterial Genomes. Genetics, 206(4), pp.2149–2157.

  18. Gokhale, C.S., Traulsen, A., Joop, G., 2017. Social dilemma in the external immune system of the red flour beetle? It is a matter of time. Ecology & Evolution, 7(17), pp.6758–6765.

    2016
  19. Gokhale, C.S., Hauert, C., 2016. Eco-evolutionary dynamics of social dilemmas. Theoretical Population Biology, 111, 28–42.

  20. Papkou, A., Gokhale, C.S., Traulsen, A., Schulenburg, H., 2016. Host-parasite coevolution: why changing population size matters. Zoology (Jena, Germany), 119(4), pp.330–338.

    Publications of Gokhale prior to group formation

    2015
  21. Pichugin, Y., Gokhale, C.S., Garcia, J., Traulsen, A., Rainey, P.B., 2015. Modes of migration and multilevel selection in evolutionary multiplayer games. Journal of Theoretical Biology, 387, 144–153.
  22. Song, Y. Gokhale, C.S., Papkou, A., Schulenburg, H.,Traulsen, A., 2015. Host-parasite coevolution in populations of constant and variable size. BMC Evolutionary Biology, 15(1), p.212.

  23. Bauer, B., Gokhale, C.S., 2015. Repeatability of evolution on epistatic landscapes. Scientific reports, 5, p.9607.

    2014
  24. Gokhale, C.S., Traulsen, A., 2014. Evolutionary Multiplayer Games. Dynamic Games and Applications, 4(4), pp.468–488.

  25. Gokhale, C.S., Reeves, R.G., Reed, F.A., 2014. Dynamics of a combined medea-underdominant population transformation system. BMC Evolutionary Biology, 14(1), 98.

    2013
  26. Gokhale, C.S., Papkou, A., Traulsen, A., Schulenburg, H., 2013. Lotka-Volterra dynamics kills the Red Queen: population size fluctuations and associated stochasticity dramatically change host-parasite coevolution. BMC Evolutionary Biology, 13(1), p.254.
  27. Wu, B., Gokhale C.S., van Veelen, M., Wang, L., Traulsen, A., 2013. Interpretations arising from Wrightian and Malthusian fitness under strong frequency dependent selection. Ecology & Evolution, 3(5), pp.1276–1280.

  28. Wu, B., Traulsen, A., Gokhale, C.S., 2013. Dynamic Properties of Evolutionary Multi-player Games in Finite Populations. Games, 4(2), pp.182–199.

    2012
  29. Gokhale, C.S., Traulsen, A., 2012. Mutualism and evolutionary multiplayer games: revisiting the Red King. Proceedings of the Royal Society B: Biological Sciences, 279(1747), 4611–4616.
  30. Wu, B., Gokhale C.S., Wang, L., Traulsen, A., 2012. How small are small mutation rates? Journal of Mathematical Biology, 64(5), pp.803–827.

  31. Han, T.A., Traulsen, A., Gokhale, C.S., 2012. On equilibrium properties of evolutionary multi-player games with random payoff matrices. Theoretical Population Biology, 81(4), pp.264–272.

    2011

  32. Gokhale, C.S., Traulsen, A., 2011. Strategy abundance in evolutionary many-player games with multiple strategies. Journal of Theoretical Biology, 283, 180–191.

    2010
  33. Altrock, P.M., Gokhale, C.S., Traulsen, A., 2010. Stochastic slowdown in evolutionary processes. Physical Review E, 82(1), 11925.

  34. Gokhale, C.S., Traulsen, A., 2010. Evolutionary games in the multiverse. PNAS, 107(12), 5500–5504.

    2009
  35. Gokhale, C.S., Iwasa, Y., Nowak, M., Traulsen A., 2009. The pace of evolution across fitness valleys. Journal of Theoretical Biology, 259(3), 613–620.
  36. Bhardwaj, A., Mukerji, M., Sharma, S., Paul, J., Gokhale, C.S., Srivastava, A.K., Tiwari, S., 2009. MtSNPscore: a combined evidence approach for assessing cumulative impact of mitochondrial variations in disease., BMC Bioinformatics, 10 Suppl 8, S7.